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@rendeirolab

Rendeiro Lab

Research group working on computational and molecular methods to study human aging and pathology

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  1. rendeirolab.github.io rendeirolab.github.io Public

    A simple static website for the Rendeiro lab

    HTML

  2. lab-manual lab-manual Public

    The Rendeiro lab manual

    CSS 1 1

  3. LazySlide LazySlide Public

    Accessible and interoperable whole slide image analysis

    Python 174 8

  4. wsidata wsidata Public

    Efficient data structures and IO for whole slide image analysis

    Python 17 3

  5. wsi wsi Public

    A Python package for the processing of whole slide histopathological images

    Python 6

  6. _project_template _project_template Public template

    A cookiecutter template for projects in the Rendeiro lab

    Python 1

Repositories

Showing 10 of 18 repositories
  • LazySlide Public

    Accessible and interoperable whole slide image analysis

    rendeirolab/LazySlide’s past year of commit activity
    Python 174 MIT 8 5 (2 issues need help) 0 Updated Jan 18, 2026
  • lazyslide-tutorials Public

    Tutorials for lazyslide in jupyter notebooks

    rendeirolab/lazyslide-tutorials’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jan 17, 2026
  • lab-manual Public

    The Rendeiro lab manual

    rendeirolab/lab-manual’s past year of commit activity
    CSS 1 1 0 1 Updated Jan 16, 2026
  • stainx Public

    Enhanced stain normalization for histopathology images with batch processing support. Optimized for CPU, GPU (CUDA), and MPS (Apple Silicon) devices.

    rendeirolab/stainx’s past year of commit activity
    Python 4 0 2 0 Updated Jan 15, 2026
  • rendeirolab.github.io Public

    A simple static website for the Rendeiro lab

    rendeirolab/rendeirolab.github.io’s past year of commit activity
    HTML 0 0 3 0 Updated Jan 8, 2026
  • github-codeberg-mirror Public

    Mirror all repositories from a GitHub organization to Codeberg, preserving visibility settings.

    rendeirolab/github-codeberg-mirror’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 29, 2025
  • wsidata Public

    Efficient data structures and IO for whole slide image analysis

    rendeirolab/wsidata’s past year of commit activity
    Python 17 MIT 3 9 (2 issues need help) 0 Updated Nov 27, 2025
  • lazyslide-workshop-scverse-conference-2025 Public
    rendeirolab/lazyslide-workshop-scverse-conference-2025’s past year of commit activity
    Jupyter Notebook 4 0 0 0 Updated Nov 18, 2025
  • histopath-intro Public

    A small project as an entry point to working with histopathology data from a deep learning perspective.

    rendeirolab/histopath-intro’s past year of commit activity
    Python 0 0 1 0 Updated Oct 29, 2025
  • cytomine_utils Public

    A package with utilities to interact with Cytomine's API

    rendeirolab/cytomine_utils’s past year of commit activity
    Python 0 0 0 0 Updated Oct 8, 2025
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