[DO NOT MERGE] Refactor openml-sklearn back into openml-python

openml/extensions/base/__init__.py

@@ -0,0 +1,13 @@
+# License: BSD 3-Clause
+
+"""Base classes for OpenML extensions."""
+
+from openml.extensions.base._connector import OpenMLAPIConnector
+from openml.extensions.base._executor import ModelExecutor
+from openml.extensions.base._serializer import ModelSerializer
+
+__all__ = [
+    "ModelExecutor",
+    "ModelSerializer",
+    "OpenMLAPIConnector",
+]

openml/extensions/base/_connector.py

@@ -0,0 +1,28 @@
+# License: BSD 3-Clause
+
+"""Base class for OpenML API connectors."""
+
+from __future__ import annotations
+
+from abc import ABC, abstractmethod
+from typing import TYPE_CHECKING, Any
+
+if TYPE_CHECKING:
+    from openml.extensions.base import ModelExecutor, ModelSerializer
+
+
+class OpenMLAPIConnector(ABC):
+    """Base class for OpenML API connectors."""
+
+    @abstractmethod
+    def serializer(self) -> ModelSerializer:
+        """Return the serializer for this API."""
+
+    @abstractmethod
+    def executor(self) -> ModelExecutor:
+        """Return the executor for this API."""
+
+    @classmethod
+    @abstractmethod
+    def supports(cls, estimator: Any) -> bool:
+        """High-level check if this connector supports the estimator instance or flow."""

openml/extensions/base/_executor.py

@@ -0,0 +1,151 @@
+# License: BSD 3-Clause
+
+"""Base class for estimator executors."""
+
+from __future__ import annotations
+
+from abc import ABC, abstractmethod
+from collections import OrderedDict
+from typing import TYPE_CHECKING, Any
+
+if TYPE_CHECKING:
+    import numpy as np
+    import scipy.sparse
+
+    from openml.flows import OpenMLFlow
+    from openml.runs.trace import OpenMLRunTrace, OpenMLTraceIteration
+    from openml.tasks.task import OpenMLTask
+
+
+class ModelExecutor(ABC):
+    """Define runtime execution semantics for a specific API type."""
+
+    @abstractmethod
+    def seed_model(self, model: Any, seed: int | None) -> Any:
+        """Set the seed of all the unseeded components of a model and return the seeded model.
+
+        Required so that all seed information can be uploaded to OpenML for reproducible results.
+
+        Parameters
+        ----------
+        model : Any
+            The model to be seeded
+        seed : int
+
+        Returns
+        -------
+        model
+        """
+
+    @abstractmethod
+    def _run_model_on_fold(  # noqa: PLR0913
+        self,
+        model: Any,
+        task: OpenMLTask,
+        X_train: np.ndarray | scipy.sparse.spmatrix,
+        rep_no: int,
+        fold_no: int,
+        y_train: np.ndarray | None = None,
+        X_test: np.ndarray | scipy.sparse.spmatrix | None = None,
+    ) -> tuple[np.ndarray, np.ndarray | None, OrderedDict[str, float], OpenMLRunTrace | None]:
+        """Run a model on a repeat, fold, subsample triplet of the task.
+
+        Returns the data that is necessary to construct the OpenML Run object. Is used by
+        :func:`openml.runs.run_flow_on_task`.
+
+        Parameters
+        ----------
+        model : Any
+            The UNTRAINED model to run. The model instance will be copied and not altered.
+        task : OpenMLTask
+            The task to run the model on.
+        X_train : array-like
+            Training data for the given repetition and fold.
+        rep_no : int
+            The repeat of the experiment (0-based; in case of 1 time CV, always 0)
+        fold_no : int
+            The fold nr of the experiment (0-based; in case of holdout, always 0)
+        y_train : Optional[np.ndarray] (default=None)
+            Target attributes for supervised tasks. In case of classification, these are integer
+            indices to the potential classes specified by dataset.
+        X_test : Optional, array-like (default=None)
+            Test attributes to test for generalization in supervised tasks.
+
+        Returns
+        -------
+        predictions : np.ndarray
+            Model predictions.
+        probabilities :  Optional, np.ndarray
+            Predicted probabilities (only applicable for supervised classification tasks).
+        user_defined_measures : OrderedDict[str, float]
+            User defined measures that were generated on this fold
+        trace : Optional, OpenMLRunTrace
+            Hyperparameter optimization trace (only applicable for supervised tasks with
+            hyperparameter optimization).
+        """
+
+    @abstractmethod
+    def check_if_model_fitted(self, model: Any) -> bool:
+        """Returns True/False denoting if the model has already been fitted/trained.
+
+        Parameters
+        ----------
+        model : Any
+
+        Returns
+        -------
+        bool
+        """
+
+    @abstractmethod
+    def obtain_parameter_values(
+        self,
+        flow: OpenMLFlow,
+        model: Any = None,
+    ) -> list[dict[str, Any]]:
+        """Extracts all parameter settings required for the flow from the model.
+
+        If no explicit model is provided, the parameters will be extracted from `flow.model`
+        instead.
+
+        Parameters
+        ----------
+        flow : OpenMLFlow
+            OpenMLFlow object (containing flow ids, i.e., it has to be downloaded from the server)
+
+        model: Any, optional (default=None)
+            The model from which to obtain the parameter values. Must match the flow signature.
+            If None, use the model specified in ``OpenMLFlow.model``.
+
+        Returns
+        -------
+        list
+            A list of dicts, where each dict has the following entries:
+            - ``oml:name`` : str: The OpenML parameter name
+            - ``oml:value`` : mixed: A representation of the parameter value
+            - ``oml:component`` : int: flow id to which the parameter belongs
+        """
+
+    # Abstract methods for hyperparameter optimization
+
+    @abstractmethod
+    def instantiate_model_from_hpo_class(
+        self,
+        model: Any,
+        trace_iteration: OpenMLTraceIteration,
+    ) -> Any:
+        """Instantiate a base model which can be searched over by the hyperparameter optimization
+        model.
+
+        Parameters
+        ----------
+        model : Any
+            A hyperparameter optimization model which defines the model to be instantiated.
+        trace_iteration : OpenMLTraceIteration
+            Describing the hyperparameter settings to instantiate.
+
+        Returns
+        -------
+        Any
+        """
+        # TODO a trace belongs to a run and therefore a flow -> simplify this part of the interface!

openml/extensions/base/_serializer.py

@@ -0,0 +1,73 @@
+# License: BSD 3-Clause
+
+"""Base class for estimator serializors."""
+
+from __future__ import annotations
+
+from abc import ABC, abstractmethod
+from typing import TYPE_CHECKING, Any
+
+if TYPE_CHECKING:
+    from openml.flows import OpenMLFlow
+
+
+class ModelSerializer(ABC):
+    """Handle the conversion between estimator instances and OpenML Flows."""
+
+    @classmethod
+    @abstractmethod
+    def can_handle_model(cls, model: Any) -> bool:
+        """Check whether a model flow can be handled by this extension.
+
+        This is typically done by checking the type of the model, or the package it belongs to.
+
+        Parameters
+        ----------
+        model : Any
+
+        Returns
+        -------
+        bool
+        """
+
+    @abstractmethod
+    def model_to_flow(self, model: Any) -> OpenMLFlow:
+        """Transform a model to a flow for uploading it to OpenML.
+
+        Parameters
+        ----------
+        model : Any
+
+        Returns
+        -------
+        OpenMLFlow
+        """
+
+    @abstractmethod
+    def flow_to_model(
+        self,
+        flow: OpenMLFlow,
+        initialize_with_defaults: bool = False,  # noqa: FBT001, FBT002
+        strict_version: bool = True,  # noqa: FBT002, FBT001
+    ) -> Any:
+        """Instantiate a model from the flow representation.
+
+        Parameters
+        ----------
+        flow : OpenMLFlow
+
+        initialize_with_defaults : bool, optional (default=False)
+            If this flag is set, the hyperparameter values of flows will be
+            ignored and a flow with its defaults is returned.
+
+        strict_version : bool, default=True
+            Whether to fail if version requirements are not fulfilled.
+
+        Returns
+        -------
+        Any
+        """
+
+    @abstractmethod
+    def get_version_information(self) -> list[str]:
+        """Return dependency and version information."""

openml/extensions/registry.py

@@ -0,0 +1,50 @@
+# License: BSD 3-Clause
+
+"""Extension registry."""
+
+from __future__ import annotations
+
+from typing import TYPE_CHECKING, Any
+
+from openml.exceptions import PyOpenMLError
+from openml.extensions.sklearn import SklearnAPIConnector
+
+if TYPE_CHECKING:
+    from openml.extensions.base import OpenMLAPIConnector
+
+API_CONNECTOR_REGISTRY: list[type[OpenMLAPIConnector]] = [
+    SklearnAPIConnector,
+]
+
+
+def resolve_api_connector(estimator: Any) -> OpenMLAPIConnector:
+    """
+    Identify and return the appropriate OpenML API connector for a given estimator.
+
+    This function iterates through the global ``API_CONNECTOR_REGISTRY`` to find
+    a connector class that supports the provided estimator instance or OpenML flow.
+    If a matching connector is found, it is instantiated and returned.
+
+    Parameters
+    ----------
+    estimator : Any
+        The estimator instance (e.g., a scikit-learn estimator) or OpenML flow for
+        which an API connector is required.
+
+    Returns
+    -------
+    OpenMLAPIConnector
+        An instance of the matching API connector.
+
+    Raises
+    ------
+    OpenMLException
+        If no connector is found in the registry that supports the provided
+        model, or if multiple connectors in the registry claim support for
+        the provided model.
+    """
+    for connector_cls in API_CONNECTOR_REGISTRY:
+        if connector_cls.supports(estimator):
+            return connector_cls()
+
+    raise PyOpenMLError("No OpenML API connector supports this estimator.")

openml/extensions/sklearn/__init__.py

@@ -0,0 +1,13 @@
+# License: BSD 3-Clause
+
+"""OpenML extension for Scikit-learn."""
+
+from openml.extensions.sklearn.connector import SklearnAPIConnector
+from openml.extensions.sklearn.executor import SklearnExecutor
+from openml.extensions.sklearn.serializer import SklearnSerializer
+
+__all__ = [
+    "SklearnAPIConnector",
+    "SklearnExecutor",
+    "SklearnSerializer",
+]