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Eliminate all edges with biolink:same_as for the predicate

canonicalizationHas to do with our canonicalization/entity resolution workHas to do with our canonicalization/entity resolution work

verify this fix in next kg2 build

Status: Open.

#493 In RTXteam/RTX-KG2;

· hodgesf opened on Jan 14, 2026

Eliminate PathWhiz ingestion

canonicalizationHas to do with our canonicalization/entity resolution workHas to do with our canonicalization/entity resolution work

verify this fix in next kg2 build

Status: Open.

#492 In RTXteam/RTX-KG2;

· hodgesf opened on Jan 14, 2026

DrugCentral external references being incorrectly mapped to biolink:same_as

canonicalizationHas to do with our canonicalization/entity resolution workHas to do with our canonicalization/entity resolution work

fix-in-next-build

verify this fix in next kg2 build

Status: Open.

Bug

#491 In RTXteam/RTX-KG2;

· hodgesf opened on Jan 14, 2026

Strange NCIT edges

Status: Open.

#490 In RTXteam/RTX-KG2;

· edeutsch opened on Jan 8, 2026

Shouldn't <code>finish-snakemake.sh</code> be run with bash <code>errexit</code> ?

good first issueGood for newcomersGood for newcomers

housekeeping

low priority

Status: Open.

#488 In RTXteam/RTX-KG2;

· saramsey opened on Dec 21, 2025

Validation of KG2.10.3c against latest KGX format

Status: Open.

#487 In RTXteam/RTX-KG2;

· bazarkua opened on Dec 16, 2025

check of RTX-KG2.10.3c vs. RTX-KG2.10.2c

Status: Open.

#486 In RTXteam/RTX-KG2;

· saramsey opened on Dec 16, 2025

are there URLs for specific RTX-KG2 edges that come from KEGG?

Status: Open.

#484 In RTXteam/RTX-KG2;

· saramsey opened on Nov 26, 2025

Ingest NCT clinical trial record numbers in the <code>clinicaltrialskg_tsv_to_kg_jsonl.py</code> script

bugSomething isn't workingSomething isn't working

high priority

Status: Open.

Bug

#483 In RTXteam/RTX-KG2;

· saramsey opened on Nov 21, 2025

Why does ARAX not know about PUBCHEM.COMPOUND:22691495?

Status: Open.

#482 In RTXteam/RTX-KG2;

· saramsey opened on Nov 19, 2025

Edge qualifier field names (i.e., property names) are wrong

bugSomething isn't workingSomething isn't working

Status: Open.

Bug

#481 In RTXteam/RTX-KG2;

· saramsey opened on Nov 6, 2025

biolink:in_taxon is being incorrectly remapped to biolink:subclass_of

verify this fix in next kg2 build

Status: Open.

#479 In RTXteam/RTX-KG2;

· saramsey opened on Nov 5, 2025