SHS user documentation

[2bPro]

EIDF Documentation Pull Request

Description

• Extended the Overview page to add roles and responsibilities and contact sections
• Collapsed Network Access Controls, Safe Haven Access, and Virtual Desktop connections into a single page called "Access" and de-duplicated information
• Added a Software Management page containing information about available software, system maintenance, and guide for managing R packages post-maintenance (SHS board ticket). This document was also added to its own branch (bp/maintenance-docs) in case the rest of the changes are not acceptable.
• Removed the "Using the HPC Cluster" page from the navigation as most of the information was duplicated on "Accessing the SDF Inside the EPCC TRE" page.
• Renamed the "Superdome Flex Tutorial" navigation section to "HPC Service".
• Renamed the "TRE Container User Guide" navigation section to "Container Service"

Type of change

Please delete options that are not relevant.

• Incorrect Documentation
• Incomplete Documentation
• Missing Documentation
• Formatting
• New Documentation

What has to be reviewed

SHS documentation.

Checklist

• Documentation follows the project style guidelines
• Ensure Contact details contain Service Emails and Numbers
• Self-review of documentation using mkdocs on local system
• Spellcheck has been performed
• Pre-commit has been run and passed

[kavousan]

Thank you for drafting; sorry I took so very long...

[2bPro]

Hidden pages:

• https://docs.eidf.ac.uk/safe-haven-services/databases
• https://docs.eidf.ac.uk/safe-haven-services/code-management-mirroring-service
• https://docs.eidf.ac.uk/safe-haven-services/shs-open-ondemand - this contains all TRE->SHS changes, original hidden pages remain
• https://docs.eidf.ac.uk/safe-haven-services/shs-gpu-service - this contains all TRE->SHS changes, original hidden pages remain

[kavousan]

In this file, URLs seems to have changed from tre to shs; is this correct?

[kavousan]

Thanks for all this work!

I asked a question on mkdocs.yml.

But what concerns me is that there are GPU and OOD and database files in this PR, that I don't think were in the previous one. What is the correct thing to do?